Plot options

 

Use multiple genes

Use list of genes Use mean expression of selected genes
Use ratio of two genes Filter by median expression
more genes param

Example

Example input for multiple genes:
1007_s_at 1
200000_s_at -1
31637_s_at 0.5
40016_g_at -2

Explanation:
first: normal,
second: gene is inverted,
third: gene has weight,
fourth: gene has weight and is inverted

You can also use following format:
1007_s_at, 1
200000_s_at, -1
31637_s_at, 0.5
40016_g_at, -2

New analysis options

Split patients by
Auto select best cutoff INFO
Trichotomization:  INFO
INFO INFO
INFO INFO

Pathology
Stage:
Grade:
AJCC_T:
Vascular invasion:
Patient
Gender:
Race:
Sorafenib treatment:
Risk factors
Alcohol consumption:
Hepatitis virus:

Please note: the generated p value does not include correction for multiple hypothesis testing by default.

n = number of patients with available clinical data

Please kindly cite our paper to support further development: Menyhart O, Nagy A, Gyorffy B. Determining consistent prognostic biomarkers of overall survival and vascular invasion in hepatocellular carcinoma. R Soc Open Sci., 2018 Dec 5;5(122):181006. doi: 10.1098/rsos.181006.

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