Use multiple genes

Use list of genes

Use mean expression of selected genes

more genes param

Example

Example input for multiple genes:
1007_s_at 1
200000_s_at -1
31637_s_at 0.5
40016_g_at -2

Explanation:
first: normal,
second: gene is inverted,
third: gene has weight,
fourth: gene has weight and is inverted

You can also use following format:
1007_s_at, 1
200000_s_at, -1
31637_s_at, 0.5
40016_g_at, -2

Split patients by
	Auto select best cutoff
	Trichotomization
Survival:		Compute median survival:
Follow up threshold:		Censore at threshold:

Restrict analysis to subtypes...

Stage:
Gender:
Race:
Grade:
Mutation burden:
Neoantigen load:

Restrict analysis based on cellular content…

Basophils:
B-cells:
CD4+ memory T-cells:
CD8+ T-cells:
Eosinophils:
Macrophages:
Mesenchymal stem cells:
Natural killer T-cells:
Regulatory T-cells:
Type 1 T-helper cells:
Type 2 T-helper cells:

Please note: the generated p value does not include correction for multiple hypothesis testing by default.

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Please kindly cite our latest paper to support further development: Gyorffy B: Discovery and ranking of the most robust prognostic biomarkers in serous ovarian cancer, Geroscience, 2023, doi: 10.1007/s11357-023-00742-4.

Plot line thickness:
Plot text size:
Plot text format:
Plot title:
P-value position:
Legend position:

	Select all
	Bladder Carcinoma (n=409)
	Breast cancer (n=1077)
	Cervical squamous cell carcinoma (n=307)
	Esophageal Adenocarcinoma (n=89)
	Esophageal Squamous Cell Carcinoma (n=95)
	Head-neck squamous cell carcinoma (n=523)
	Kidney renal clear cell carcinoma (n=516)
	Kidney renal papillary cell carcinoma (n=291)
	Liver hepatocellular carcinoma (n=372)
	Lung adenocarcinoma (n=513)
	Lung squamous cell carcinoma (n=478)
	Ovarian cancer (n=486)
	Pancreatic ductal adenocarcinoma (n=178)
	Pheochromocytoma and Paraganglioma (n=179)
	Rectum adenocarcinoma (n=160)
	Sarcoma (n=259)
	Stomach adenocarcinoma (n=436)
	Testicular Germ Cell Tumor (n=134)
	Thymoma (n=124)
	Thyroid carcinoma (n=506)
	Uterine corpus endometrial carcinoma (n=538)

Generate high resolution TIFF file:
Invert HR values below 1:
Export plot data as text:

Processing...

Use multiple genes

Example

Restrict analysis to subtypes...

Restrict analysis based on cellular content…